Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947144.1_cds_XP_016488979.1_79552
CDS Infomation

[gene=LOC107808933] [db_xref=GeneID:107808933] [protein=protein POLLEN DEFECTIVE IN GUIDANCE 1-like] [protein_id=XP_016488979.1] [location=join(1239..1860,2739..2890,3218..3321,10044..10132,10279..10352,10762..10912,10993..11160,13011..13108,13211..13333,13546..13614,13821..13907)] [gbkey=CDS]
Sequence

ATGGCGTTGAGATCAACTGGACGCAAGGTCTCATTTGACGTTCTCTCAACTTCCATCCTA
GACGACGATCAGGATTACGATTCCTCCACCGCGACTCTCCCTCGATCCAATTCCGATCCT
CCTCCGCAGCTTCTGCCTAATGATGACGCCACAAGCCCAACCGGAAACCGCAAGAGGAAG
AAGAAAAAGAAGAAGCACAAGAGAATCGCCGAGCATTCCACAATTTCCGAATATTCCGTC
ACGGACGAGCAGCTAGGCCGCTCATCCTCCGTCGGGGAATTTAGCGGTTACTGTTACAGT
GTTGCTCAGAGCAGCAGTGTTGTGGTATGTGAGGAACCTGTTACACTGCCGAAGCCTGAG
AGTAATTGTTCAGTGAGTTCAGTTTCTGGGCTTCCGTTTGGGGAGTTGAGGCAAAGAAAT
GTTATGGTCAATGGAGTGACCGAAGAGAGCGTCGGATCACCACAGATTAGTGAGAGACAA
AATGAGAGTGTTGTTAAGGAATTGGAATCGAGGTCAAATTCGAGAGTCGAAGTGAATGTG
AATATGAATGGGGTTGCAGGGAGGAGTTTGGAGAAGGAAGCGTCTTTAGATTGGAAGAAG
TTGATGGCTGAAGATCCCAATCAAACATTTCCGGTGGATAAGTCACCAATGAAGTGCTTC
ATGGAAGAGATGTATGCGGGTAATTCCTTAAGGAGTACAGTTGCCCGCGGGGATGATAAA
GAGCGGCAAAGAGTTTATGATACCATATTTCGCTTACCATGGCGATGTGAGCTGCTTATT
AATGTTGGCTTTTTTGTCTGCTTTGATTCATTCCTGTCACTGCTAACTGTCATGCCAACG
AGAATAATCATGATCTGCTGGAGGTTTCTGAAAACAAGGCAGTTCAAGAAACTTTCCGCA
GTTGAGCTTTCTGATATTGGCTGTTGTGTTGCCCTGGCCAGTGGGGCGATTTTGCTGCAA
CAAACAGATATCAGCCTAATCTATCACATGATTCGTGGTCAAGGGACAATCAAGCTTTAT
GTAGTTTACAATGTGTTGGAGGTTTTTGATAGACTATTCCAAAGCTTTAGTGGAGATGTG
ATGCAGACTCTCTTTAATACAGCAGAAGGGCTTGCAAATAGCTCAACGGAAAATATGCAA
TTGTGGATGAGAAGATTTATTATGGATGAAGTTGTAGCTGTGGCTTCATCAATTCTTCAT
TCTTTCATCTTGCTAGCTCAAGCTATCACTTTGTCAACCTGTATAGTTGCCCACAACAAT
GCATTATTTGCTTTGCTTGTATCAAACAATTTTGCGGAAATAAAGAGCAATGTATTCAAA
CGGTACAGCAAGGATAACGTTCACAATCTAGTGTATTATGATTCAGTGGAGCGGTTCCAT
ATTTCGGCATTTCTCTTATTTGTGTTGGCTCAAAACCTTCTGGAGGCAGATGGACCTTGG
TTTGAAAGTTTTCTTTGTAATGCATTTGTCGTCTACGTAAGTGAGATGACAATTGATATA
ATCAAGCATTCATTCATCGCAAAATTTAACAATATCAAGCCGATTGCCTTTTCAGAGTTT
CTTGAAGATCTCTGTAAGCAGACACTGAATATTCAGACGGACAATATGAAGAATAACCTC
ACTTTCGTCCCTTTGGCACCTGCTTGTGTGGTAATCCGGGTGCTGCGTCCTGTGTTTGCT
GCTCATCTTCCCNCGTGCAGCGGGATGCATTCCTGTGGAAGTATTTATGCCAAATGA

Peptide Sequence

PEP ID

XP_016488979.1
PEP Infomation

PREDICTED: protein POLLEN DEFECTIVE IN GUIDANCE 1-like [Nicotiana tabacum]
Sequence

MALRSTGRKVSFDVLSTSILDDDQDYDSSTATLPRSNSDPPPQLLPNDDATSPTGNRKRK
KKKKKHKRIAEHSTISEYSVTDEQLGRSSSVGEFSGYCYSVAQSSSVVVCEEPVTLPKPE
SNCSVSSVSGLPFGELRQRNVMVNGVTEESVGSPQISERQNESVVKELESRSNSRVEVNV
NMNGVAGRSLEKEASLDWKKLMAEDPNQTFPVDKSPMKCFMEEMYAGNSLRSTVARGDDK
ERQRVYDTIFRLPWRCELLINVGFFVCFDSFLSLLTVMPTRIIMICWRFLKTRQFKKLSA
VELSDIGCCVALASGAILLQQTDISLIYHMIRGQGTIKLYVVYNVLEVFDRLFQSFSGDV
MQTLFNTAEGLANSSTENMQLWMRRFIMDEVVAVASSILHSFILLAQAITLSTCIVAHNN
ALFALLVSNNFAEIKSNVFKRYSKDNVHNLVYYDSVERFHISAFLLFVLAQNLLEADGPW
FESFLCNAFVVYVSEMTIDIIKHSFIAKFNNIKPIAFSEFLEDLCKQTLNIQTDNMKNNL
TFVPLAPACVVIRVLRPVFAAHLPXCSGMHSCGSIYAK

Transcript Sequence

Gene sequence data has not been registered.